Package: ConvergeR
Title: Whitfield Convergence Score and Seurat Metadata Association
Version: 0.99.2
Authors@R: 
    person('Paul', 'de Boissier', , 'paul.deboissier04@gmail.com', role = c('aut','cre'), comment = c(ORCID = "0000-0003-2246-1580"))
Description: Calculates the convergence score defined by Whitfield et
        al. 2026 <doi:10.1158/0008-5472.CAN-25-4403>. It allows
        visualization of this score alongside qualitative and
        quantitative Seurat object metadata via barplots and density
        curves, and runs appropriate statistical tests for
        associations. The code was built, corrected and adapted to
        SingleCellExpriment with the help of Gemini.
Depends: R (>= 4.4.0)
License: GPL-3
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Imports: dplyr, ggplot2, magrittr, methods, rlang, scales, Seurat,
        SeuratObject, SingleCellExperiment, SummarizedExperiment
Config/roxygen2/version: 8.1.0
Suggests: BiocStyle, knitr, msigdbr, rmarkdown, scuttle, testthat (>=
        3.0.0)
Config/testthat/edition: 3
VignetteBuilder: knitr
biocViews: Software, SingleCell, Transcriptomics, GeneExpression
URL: https://github.com/pauldeboissier1/ConvergeR
BugReports: https://github.com/pauldeboissier1/ConvergeR/issues
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libpng-dev
        libuv1-dev libxml2-dev libssl-dev python3 zlib1g-dev
Repository: https://pauldeboissier1.r-universe.dev
Date/Publication: 2026-10-08 09:29:49 UTC
RemoteUrl: https://github.com/pauldeboissier1/converger
RemoteRef: HEAD
RemoteSha: fb0f2ff8e71fc48c328f43f27558004554b01046
NeedsCompilation: no
Packaged: 2026-10-11 10:50:37 UTC; root
Author: Paul de Boissier [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-2246-1580>)
Maintainer: Paul de Boissier <paul.deboissier04@gmail.com>